Transcript: ENST00000521604.2 TCEA1-002

Description

transcription elongation factor A (SII), 1 [Source:HGNC Symbol;Acc:11612]

Gene Synonyms

GTF2S, SII, TCEA, TF2S, TFIIS

Location

Chromosome 8: 54,879,116-54,935,089 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 21 domains and features, is associated with 25292 variant alleles and maps to 582 oligo probes.

Gene

This transcript is a product of gene ENSG00000187735.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000521604.2	TCEA1-002	2858	301aa	ENSP00000428426.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47858	P23193	NM_006756.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396401.3	TCEA1-013	2718	280aa	ENSP00000395483.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47857	P23193	NM_201437.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522635.1	TCEA1-003	1432	117aa	ENSP00000429192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z4S1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520534.1	TCEA1-011	635	111aa	ENSP00000428370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIS7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518784.1	TCEA1-010	586	90aa	ENSP00000429182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518310.1	TCEA1-009	569	47aa	ENSP00000428868.1	Nonsense mediated decay		E5RFI1	-	-
ENST00000519704.1	TCEA1-008	563	45aa	ENSP00000430450.1	Nonsense mediated decay		E5RK46	-	-
ENST00000521086.2	TCEA1-001	2966	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522397.1	TCEA1-006	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521836.1	TCEA1-005	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517351.1	TCEA1-004	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,858 bps, Translation length: 301 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23193

CCDS

This transcript is a member of the Human CCDS set: CCDS47858

Version

ENST00000521604.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000377975 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000521604.2 TCEA1-002

Summary