Transcript: ENST00000517351.1 TCEA1-004

Description

transcription elongation factor A (SII), 1 [Source:HGNC Symbol;Acc:11612]

Gene Synonyms

GTF2S, SII, TCEA, TF2S, TFIIS

Location

Chromosome 8: 54,906,255-54,934,870 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 13424 variant alleles and maps to 261 oligo probes.

Gene

This transcript is a product of gene ENSG00000187735.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000521604.2	TCEA1-002	2858	301aa	ENSP00000428426.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47858	P23193	NM_006756.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396401.3	TCEA1-013	2718	280aa	ENSP00000395483.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47857	P23193	NM_201437.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522635.1	TCEA1-003	1432	117aa	ENSP00000429192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z4S1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520534.1	TCEA1-011	635	111aa	ENSP00000428370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIS7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518784.1	TCEA1-010	586	90aa	ENSP00000429182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518310.1	TCEA1-009	569	47aa	ENSP00000428868.1	Nonsense mediated decay		E5RFI1	-	-
ENST00000519704.1	TCEA1-008	563	45aa	ENSP00000430450.1	Nonsense mediated decay		E5RK46	-	-
ENST00000521086.2	TCEA1-001	2966	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522397.1	TCEA1-006	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521836.1	TCEA1-005	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517351.1	TCEA1-004	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 539 bps,

Version

ENST00000517351.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000377983 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000517351.1 TCEA1-004

Summary