Transcript: ENST00000370321.3 RPL5-001

Description

ribosomal protein L5 [Source:HGNC Symbol;Acc:10360]

Gene Synonyms

DBA6, L5, RNU21, U21

Location

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 5029 variant alleles and maps to 501 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370321.3	RPL5-001	1043	297aa	ENSP00000359345.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS741	A2RUM7 B3KTM6 P46777 Q5T7N0 Q8WYP1 R4GNJ2	NM_000969.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315741.5	RPL5-006	681	130aa	ENSP00000359338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7N0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470843.1	RPL5-003	694	63aa	ENSP00000473675.1	Nonsense mediated decay		R4GNJ2	-	-
ENST00000497519.1	RPL5-005	1210	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461952.1	RPL5-004	1116	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,043 bps, Translation length: 297 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P46777

CCDS

This transcript is a member of the Human CCDS set: CCDS741

Version

ENST00000370321.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000030058 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.