Transcript: ENST00000461952.1 RPL5-004

Description

ribosomal protein L5 [Source:HGNC Symbol;Acc:10360]

Gene Synonyms

DBA6, L5, RNU21, U21

Location

About this transcript

This transcript has 3 exons, is associated with 1780 variant alleles and maps to 270 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370321.3	RPL5-001	1043	297aa	ENSP00000359345.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS741	A2RUM7 B3KTM6 P46777 Q5T7N0 Q8WYP1 R4GNJ2	NM_000969.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315741.5	RPL5-006	681	130aa	ENSP00000359338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7N0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470843.1	RPL5-003	694	63aa	ENSP00000473675.1	Nonsense mediated decay		R4GNJ2	-	-
ENST00000497519.1	RPL5-005	1210	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461952.1	RPL5-004	1116	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,116 bps,

Version

ENST00000461952.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000030061 (version 1)