Transcript: ENST00000294129.2 NCKIPSD-001

Description

NCK interacting protein with SH3 domain [Source:HGNC Symbol;Acc:15486]

Gene Synonyms

AF3P21, DIP, DIP1, ORF1, SPIN90, VIP54, WASLBP, WISH

Location

Chromosome 3: 48,711,277-48,723,360 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 6362 variant alleles and maps to 489 oligo probes.

Gene

This transcript is a product of gene ENSG00000213672.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294129.2	NCKIPSD-001	2989	722aa	ENSP00000294129.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2776	C9JC20 C9JMQ4 Q9NZQ3	NM_016453.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416649.2	NCKIPSD-002	2925	715aa	ENSP00000389059.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46827	Q9NZQ3	NM_184231.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341520.4	NCKIPSD-201	2263	722aa	ENSP00000342621.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC20 C9JMQ4 Q9NZQ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439518.1	NCKIPSD-006	1214	395aa	ENSP00000409675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC20 C9JMQ4 C9JSC3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426678.1	NCKIPSD-011	897	165aa	ENSP00000416904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC20	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453349.1	NCKIPSD-010	889	203aa	ENSP00000408588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC20 C9JMQ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415281.1	NCKIPSD-008	803	268aa	ENSP00000406442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000413374.1	NCKIPSD-007	725	151aa	ENSP00000396683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0T9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000454134.1	NCKIPSD-009	998	58aa	ENSP00000416144.1	Nonsense mediated decay		F8WCR8	-	-
ENST00000470006.1	NCKIPSD-005	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,989 bps, Translation length: 722 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZQ3

CCDS

This transcript is a member of the Human CCDS set: CCDS2776

Version

ENST00000294129.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257520 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000294129.2 NCKIPSD-001

Summary