Transcript: ENST00000413374.1 NCKIPSD-007

Description

NCK interacting protein with SH3 domain [Source:HGNC Symbol;Acc:15486]

Gene Synonyms

AF3P21, DIP, DIP1, ORF1, SPIN90, VIP54, WASLBP, WISH

Location

Chromosome 3: 48,711,799-48,716,554 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 2302 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSG00000213672.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294129.2	NCKIPSD-001	2989	722aa	ENSP00000294129.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2776	C9JC20 C9JMQ4 Q9NZQ3	NM_016453.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416649.2	NCKIPSD-002	2925	715aa	ENSP00000389059.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46827	Q9NZQ3	NM_184231.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341520.4	NCKIPSD-201	2263	722aa	ENSP00000342621.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC20 C9JMQ4 Q9NZQ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439518.1	NCKIPSD-006	1214	395aa	ENSP00000409675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC20 C9JMQ4 C9JSC3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426678.1	NCKIPSD-011	897	165aa	ENSP00000416904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC20	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453349.1	NCKIPSD-010	889	203aa	ENSP00000408588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC20 C9JMQ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415281.1	NCKIPSD-008	803	268aa	ENSP00000406442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000413374.1	NCKIPSD-007	725	151aa	ENSP00000396683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0T9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000454134.1	NCKIPSD-009	998	58aa	ENSP00000416144.1	Nonsense mediated decay		F8WCR8	-	-
ENST00000470006.1	NCKIPSD-005	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 725 bps, Translation length: 151 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000413374.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344847 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000413374.1 NCKIPSD-007

Summary