Transcript: ENST00000267622.4 TRIP11-001

Description

thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:12305]

Gene Synonyms

ACG1A, CEV14, GMAP-210, TRIP-11, TRIP230, Trip230

Location

About this transcript

This transcript has 21 exons, is annotated with 38 domains and features, is associated with 31595 variant alleles and maps to 836 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267622.4	TRIP11-001	9996	1979aa	ENSP00000267622.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9899	G3V4R7 Q15643	NM_004239.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554357.1	TRIP11-002	5246	1695aa	ENSP00000451032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555516.2	TRIP11-005	564	67aa	ENSP00000451944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4R7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557017.1	TRIP11-004	828	176aa	ENSP00000451607.1	Nonsense mediated decay		H0YJI2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555105.1	TRIP11-003	769	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 9,996 bps, Translation length: 1,979 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15643

CCDS

This transcript is a member of the Human CCDS set: CCDS9899

Version

ENST00000267622.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000411823 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.