Transcript: ENST00000554357.1 TRIP11-002

Description

thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:12305]

Gene Synonyms

ACG1A, CEV14, GMAP-210, TRIP-11, TRIP230, Trip230

Location

About this transcript

This transcript has 15 exons, is annotated with 31 domains and features, is associated with 19619 variant alleles and maps to 416 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267622.4	TRIP11-001	9996	1979aa	ENSP00000267622.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9899	G3V4R7 Q15643	NM_004239.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554357.1	TRIP11-002	5246	1695aa	ENSP00000451032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555516.2	TRIP11-005	564	67aa	ENSP00000451944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4R7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557017.1	TRIP11-004	828	176aa	ENSP00000451607.1	Nonsense mediated decay		H0YJI2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555105.1	TRIP11-003	769	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 5,246 bps, Translation length: 1,695 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000554357.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411824 (version 1)