Transcript: ENST00000603852.1 C17orf66-004

Description

chromosome 17 open reading frame 66 [Source:HGNC Symbol;Acc:26548]

Gene Synonyms

FLJ32830

Location

Chromosome HG385_PATCH: 34,182,765-34,195,909 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 3 domains and features, is associated with 5793 variant alleles and maps to 324 oligo probes.

Gene

This transcript is a product of gene ENSG00000270379.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000604834.1	C17orf66-001	1974	570aa	ENSP00000473941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RTY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603870.1	C17orf66-005	1829	530aa	ENSP00000473760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RTY3 K7ERP7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603218.1	C17orf66-007	549	140aa	ENSP00000474337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7ERP7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000603323.1	C17orf66-006	1903	283aa	ENSP00000474391.1	Nonsense mediated decay	K7EM23	-	-
ENST00000603852.1	C17orf66-004	1528	380aa	ENSP00000474899.1	Nonsense mediated decay	A2RTY3	-	-
ENST00000605080.1	C17orf66-003	1521	340aa	ENSP00000474893.1	Nonsense mediated decay	A2RTY3	-	-
ENST00000604376.1	C17orf66-008	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000604400.1	C17orf66-002	2608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 15, Coding exons: 12, Transcript length: 1,528 bps, Translation length: 380 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2RTY3

Version

ENST00000603852.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project, projected to the alternate locus via a mapping from the primary assembly.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000449274 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000603852.1 C17orf66-004

Summary