Transcript: ENST00000596998.1 OPN1MW-002

Description

opsin 1 (cone pigments), medium-wave-sensitive [Source:HGNC Symbol;Acc:4206]

Gene Synonyms

CBBM, CBD, COD5, GCP, GOP, OPN1MW1

Location

Chromosome HG1497_PATCH: 153,358,526-153,364,605 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 792 variant alleles and maps to 378 oligo probes.

Gene

This transcript is a product of gene ENSG00000268221.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000595290.1	OPN1MW-001	1257	364aa	ENSP00000472316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P04001	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596998.1	OPN1MW-002	590	164aa	ENSP00000469055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000595330.1	OPN1MW-003	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 590 bps, Translation length: 164 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000596998.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project, projected to the alternate locus via a mapping from the primary assembly.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000280568 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000596998.1 OPN1MW-002

Summary