Transcript: ENST00000253807.2 PCDHAC1-001

Description

protocadherin alpha subfamily C, 1 [Source:HGNC Symbol;Acc:8676]

Gene Synonyms

PCDH-ALPHA-C1

Location

About this transcript

This transcript has 4 exons, is annotated with 51 domains and features, is associated with 34882 variant alleles and maps to 557 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253807.2	PCDHAC1-001	5299	963aa	ENSP00000253807.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4241	Q9H158	NM_018898.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409700.3	PCDHAC1-201	3084	818aa	ENSP00000386356.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H158	NM_031882.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 5,299 bps, Translation length: 963 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H158

CCDS

This transcript is a member of the Human CCDS set: CCDS4241

Version

ENST00000253807.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251798 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.