Transcript: ENST00000335295.4 HBB-001

Description

hemoglobin, beta [Source:HGNC Symbol;Acc:4827]

Gene Synonyms

CD113t-C, HBD, beta-globin

Location

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 2809 variant alleles and maps to 462 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335295.4	HBB-001	628	147aa	ENSP00000333994.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7753	B3VL12 B5ANL9 D5FZW3 D9YZU5 E9M263 F8W6P5 J7LKS8 K4EN30 P68871 Q0Z944 Q14484 Q6VFQ5 Q7Z2K5 Q86VF0 Q9BXA2 Q9GZL9 Q9H1I6	NM_000518.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380315.2	HBB-004	502	90aa	ENSP00000369671.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VL12 B5ANL9 D5FZW3 E9M263 F8W6P5 J7LKS8 K4EN30 Q14484 Q7Z2K5 Q86VF0 Q9BXA2 Q9H1I6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485743.1	HBB-002	680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475226.1	HBB-003	319	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 628 bps, Translation length: 147 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P68871

CCDS

This transcript is a member of the Human CCDS set: CCDS7753

Version

ENST00000335295.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000142977 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.