Transcript: ENST00000374114.3 RBM12-001

Description

RNA binding motif protein 12 [Source:HGNC Symbol;Acc:9898]

Gene Synonyms

HRIHFB2091, KIAA0765, SWAN

Location

Chromosome 20: 34,236,847-34,252,838 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 30 domains and features, is associated with 7372 variant alleles and maps to 725 oligo probes.

Gene

This transcript is a product of gene ENSG00000244462.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374114.3	RBM12-001	6662	932aa	ENSP00000363228.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13261	A6PVI0 A6PVI1 Q5JX62 Q69YJ7 Q9NTZ6	NM_006047.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359646.1	RBM12-003	5332	932aa	ENSP00000352668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13261	A6PVI0 A6PVI1 Q5JX62 Q69YJ7 Q9NTZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374104.3	RBM12-002	5213	932aa	ENSP00000363217.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13261	A6PVI0 A6PVI1 Q5JX62 Q69YJ7 Q9NTZ6	NM_152838.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424458.1	RBM12-004	1068	291aa	ENSP00000411036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVI0 A6PVI1 Q5JX62	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431148.1	RBM12-005	583	143aa	ENSP00000392642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVI0 A6PVI1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000435161.1	RBM12-006	565	134aa	ENSP00000411692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVI1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 6,662 bps, Translation length: 932 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NTZ6

CCDS

This transcript is a member of the Human CCDS set: CCDS13261

Version

ENST00000374114.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000078894 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000374114.3 RBM12-001

Summary