Transcript: ENST00000483505.2 TMEM199-003

Description

transmembrane protein 199 [Source:HGNC Symbol;Acc:18085]

Gene Synonyms

C17orf32, MGC45714

Location

Chromosome 17: 26,684,731-26,688,256 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1876 variant alleles and maps to 381 oligo probes.

Gene

This transcript is a product of gene ENSG00000244045.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292114.3	TMEM199-001	3148	208aa	ENSP00000292114.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11228	J3KS81 K7EJL8 Q8N511	NM_152464.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509083.1	TMEM199-201	1050	299aa	ENSP00000427614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBQ3 J3KS81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395404.3	TMEM199-002	971	34aa	ENSP00000465232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555264.2	TMEM199-004	674	125aa	ENSP00000462356.1	Nonsense mediated decay		J3KS81	-	-
ENST00000580868.1	TMEM199-008	578	89aa	ENSP00000462195.1	Nonsense mediated decay		J3KRW7	-	-
ENST00000581386.1	TMEM199-005	481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000579762.1	TMEM199-009	385	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483505.2	TMEM199-003	735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000577317.1	TMEM199-006	634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585027.1	TMEM199-007	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 735 bps,

Version

ENST00000483505.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000255678 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000483505.2 TMEM199-003

Summary