Transcript: ENST00000370646.4 HOGA1-003

Description

4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:25155]

Gene Synonyms

C10orf65, DHDPS2, DHDPSL, FLJ37472, HP3, NPL2

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 12675 variant alleles and maps to 344 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370646.4	HOGA1-003	2488	327aa	ENSP00000359680.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7467	Q86XE5	NM_138413.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370647.4	HOGA1-001	1999	164aa	ENSP00000359681.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44469	Q86XE5	NM_001134670.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370642.4	HOGA1-004	384	85aa	ENSP00000359676.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465608.1	HOGA1-002	2581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,488 bps, Translation length: 327 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86XE5

CCDS

This transcript is a member of the Human CCDS set: CCDS7467

Version

ENST00000370646.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049726 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.