Transcript: ENST00000293825.6 TNFSF12-001

Description

tumor necrosis factor (ligand) superfamily, member 12 [Source:HGNC Symbol;Acc:11927]

Gene Synonyms

APO3L, DR3LG, TWE-PRIL, TWEAK

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 4359 variant alleles and maps to 462 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000557233.1	TNFSF12-201	1768	330aa	ENSP00000451451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11108	K7EJ28 O43508 Q6U6I7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000293825.6	TNFSF12-001	1553	249aa	ENSP00000293825.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11109	O43508 Q4ACW9	NM_003809.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322272.7	TNFSF12-003	1625	134aa	ENSP00000314636.7	Nonsense mediated decay		C0H5Y4	-	-
ENST00000462811.1	TNFSF12-005	805	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462619.1	TNFSF12-004	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,553 bps, Translation length: 249 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43508

CCDS

This transcript is a member of the Human CCDS set: CCDS11109

Version

ENST00000293825.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000226951 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.