Transcript: ENST00000598540.2 PET100-004

Description

PET100 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:40038]

Gene Synonyms

C19orf79

Location

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 1010 variant alleles and maps to 231 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000594797.1	PET100-001	719	73aa	ENSP00000470539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54208	P0DJ07	NM_001171155.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601406.1	PET100-005	332	68aa	ENSP00000470935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R022	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456958.3	PET100-006	219	44aa	ENSP00000392303.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598540.2	PET100-004	375	46aa	ENSP00000470314.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000600836.1	PET100-003	474	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000601829.1	PET100-002	317	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 375 bps, Translation length: 46 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000598540.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460953 (version 2)