Transcript: ENST00000429829.1 XIST-001

Description

X inactive specific transcript (non-protein coding) [Source:HGNC Symbol;Acc:12810]

Gene Synonyms

DXS1089, DXS399E, LINC00001, NCRNA00001, SXI1, swd66

Location

About this transcript

This transcript has 6 exons, is associated with 11318 variant alleles and maps to 1410 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000429829.1	XIST-001	19275	No protein	-	lincRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602495.1	XIST-009	827	No protein	-	lincRNA	-	-
ENST00000602863.1	XIST-008	775	No protein	-	lincRNA	-	-
ENST00000416330.1	XIST-002	750	No protein	-	lincRNA	-	-
ENST00000417942.1	XIST-006	724	No protein	-	lincRNA	-	-
ENST00000434839.1	XIST-005	720	No protein	-	lincRNA	-	-
ENST00000433732.1	XIST-007	676	No protein	-	lincRNA	-	-
ENST00000602587.1	XIST-010	583	No protein	-	lincRNA	-	-
ENST00000421322.1	XIST-003	446	No protein	-	lincRNA	-	-
ENST00000445814.1	XIST-004	437	No protein	-	lincRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 19,275 bps,

Version

ENST00000429829.1

Type

LincRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000057239 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.