Transcript: ENST00000400282.2 MIR17HG-001

Description

miR-17-92 cluster host gene (non-protein coding) [Source:HGNC Symbol;Acc:23564]

Gene Synonyms

C13orf25, FGLDS2, FLJ14178, LINC00048, MIHG1, MIR17-5p, MIR18, MIR20, MIR91, MIR92-1, MIRH1, MIRHG1, MIRN17, MIRN18, MIRN18A, MIRN19A, MIRN19B1, MIRN20, MIRN20A, MIRN91, MIRN92-1, MIRN92A-1, MIRN92A1, NCRNA00048, hsa-mir-17, hsa-mir-18, hsa-mir-18a, hsa-mir-19a, hsa-mir-20, hsa-mir-20a, miR-17, miR-17-92, miR-18, miR-19a, miR-19b-1, miR-20, miR17-3p, miRNA17, miRNA18A, miRNA19A, miRNA19B1, miRNA20A, miRNA91, miRNA92-1

Location

Chromosome 13: 92,000,074-92,006,833 forward strand.

About this transcript

This transcript has 4 exons, is associated with 3950 variant alleles and maps to 297 oligo probes.

Gene

This transcript is a product of gene ENSG00000215417.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000582141.1	MIR17HG-002	2845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000581816.1	MIR17HG-003	2032	No protein	-	lincRNA	-	-
ENST00000400282.2	MIR17HG-001	931	No protein	-	lincRNA	-	-
ENST00000362310.2	MIR17HG-202	92	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000384829.1	MIR17HG-203	87	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000385012.1	MIR17HG-205	84	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000384878.1	MIR17HG-204	82	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000385233.2	MIR17HG-206	80	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000362279.1	MIR17HG-201	71	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 931 bps,

Version

ENST00000400282.2

Type

LincRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000045448 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000400282.2 MIR17HG-001

Summary