Transcript: ENST00000472495.1 ZSWIM7-003

Description

zinc finger, SWIM-type containing 7 [Source:HGNC Symbol;Acc:26993]

Gene Synonyms

SWS1

Location

Chromosome 17: 15,881,041-15,902,998 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 10431 variant alleles and maps to 215 oligo probes.

Gene

This transcript is a product of gene ENSG00000214941.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399277.1	ZSWIM7-001	2008	140aa	ENSP00000382218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42266	Q19AV6	NM_001042698.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486655.1	ZSWIM7-011	726	66aa	ENSP00000464371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRT4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472495.1	ZSWIM7-003	703	140aa	ENSP00000419138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42266	Q19AV6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490395.1	ZSWIM7-004	1264	31aa	ENSP00000464605.1	Nonsense mediated decay		J3QLK2 J3QS31	-	-
ENST00000585208.1	ZSWIM7-016	987	31aa	ENSP00000464227.1	Nonsense mediated decay		J3QLK2 J3QS31	-	-
ENST00000476496.1	ZSWIM7-014	969	30aa	ENSP00000462208.1	Nonsense mediated decay		J3KRY0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486706.2	ZSWIM7-007	918	31aa	ENSP00000463327.1	Nonsense mediated decay		J3QLK2 J3QS31	-	-
ENST00000491631.1	ZSWIM7-005	879	31aa	ENSP00000462598.1	Nonsense mediated decay		J3QLK2 J3QS31	-	-
ENST00000460315.1	ZSWIM7-009	723	32aa	ENSP00000462590.1	Nonsense mediated decay		J3KRY0 J3QLK2 J3QS07	-	-
ENST00000460252.1	ZSWIM7-008	682	32aa	ENSP00000464463.1	Nonsense mediated decay		J3KRY0 J3QLK2 J3QS07	-	-
ENST00000584519.1	ZSWIM7-021	677	26aa	ENSP00000463592.1	Nonsense mediated decay		J3QLK2	-	-
ENST00000474716.1	ZSWIM7-010	671	31aa	ENSP00000464500.1	Nonsense mediated decay		J3QLK2 J3QS31	-	-
ENST00000579955.1	ZSWIM7-020	566	78aa	ENSP00000463444.1	Nonsense mediated decay		J3QL97 J3QLK2	-	-
ENST00000399280.2	ZSWIM7-002	1869	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497434.2	ZSWIM7-015	1104	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497719.1	ZSWIM7-006	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495825.2	ZSWIM7-013	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475498.1	ZSWIM7-012	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 703 bps, Translation length: 140 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q19AV6

CCDS

This transcript is a member of the Human CCDS set: CCDS42266

Version

ENST00000472495.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000131738 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000472495.1 ZSWIM7-003

Summary