Transcript: ENST00000378312.4 TMX2-001

Description

thioredoxin-related transmembrane protein 2 [Source:HGNC Symbol;Acc:30739]

Gene Synonyms

PDIA12, PIG26, TXNDC14

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 14810 variant alleles and maps to 411 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278422.4	TMX2-002	1631	296aa	ENSP00000278422.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7967	Q9Y320	NM_015959.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378312.4	TMX2-001	1521	258aa	ENSP00000367562.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44601	Q9Y320	NM_001144012.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529403.1	TMX2-003	1697	115aa	ENSP00000437023.1	Nonsense mediated decay		G3V155	-	-
ENST00000528110.1	TMX2-009	829	103aa	ENSP00000431333.1	Nonsense mediated decay		E9PLR1	-	-
ENST00000525035.1	TMX2-008	703	115aa	ENSP00000431695.1	Nonsense mediated decay		G3V155	-	-
ENST00000524972.1	TMX2-005	696	103aa	ENSP00000437257.1	Nonsense mediated decay		E9PLR1	-	-
ENST00000530114.1	TMX2-007	663	86aa	ENSP00000436013.1	Nonsense mediated decay		E9PRL5 E9PSF0	-	-
ENST00000533602.1	TMX2-006	560	84aa	ENSP00000434002.1	Nonsense mediated decay		E9PSF0	-	-
ENST00000528042.1	TMX2-004	763	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,521 bps, Translation length: 258 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y320

CCDS

This transcript is a member of the Human CCDS set: CCDS44601

Version

ENST00000378312.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393706 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.