Transcript: ENST00000356588.3 TSGA13-002

Description

testis specific, 13 [Source:HGNC Symbol;Acc:12369]

Location

About this transcript

This transcript has 8 exons, is annotated with 1 domain and feature, is associated with 7863 variant alleles and maps to 297 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000456951.1	TSGA13-001	2046	275aa	ENSP00000406047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5824	C9JIG7 C9JVS7 Q96PP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356588.3	TSGA13-002	1372	275aa	ENSP00000348996.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5824	C9JIG7 C9JVS7 Q96PP4	NM_052933.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438346.1	TSGA13-004	567	58aa	ENSP00000407352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JVS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000443954.1	TSGA13-005	548	76aa	ENSP00000415856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIG7 C9JVS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,372 bps, Translation length: 275 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PP4

CCDS

This transcript is a member of the Human CCDS set: CCDS5824

Version

ENST00000356588.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000337998 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.