Transcript: ENST00000554938.1 LIN52-003

Description

lin-52 homolog (C. elegans) [Source:HGNC Symbol;Acc:19856]

Gene Synonyms

C14orf46, c14_5549

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 45738 variant alleles and maps to 163 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000555028.1	LIN52-001	2774	116aa	ENSP00000451812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32120	B3KN83 Q52LA3	NM_001024674.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554938.1	LIN52-003	566	97aa	ENSP00000452513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554076.1	LIN52-004	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553404.1	LIN52-002	2339	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554289.1	LIN52-005	271	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 566 bps, Translation length: 97 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000554938.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412317 (version 2)