Transcript: ENST00000330722.6 KRT6A-001

Description

keratin 6A [Source:HGNC Symbol;Acc:6443]

Gene Synonyms

CK6A, CK6C, CK6D, K6A, K6C, K6D, KRT6C, KRT6D

Location

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 3955 variant alleles and maps to 967 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330722.6	KRT6A-001	2310	564aa	ENSP00000369317.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41786	P02538	NM_005554.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549898.1	KRT6A-002	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549754.1	KRT6A-003	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549600.1	KRT6A-004	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548735.1	KRT6A-005	227	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,310 bps, Translation length: 564 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02538

CCDS

This transcript is a member of the Human CCDS set: CCDS41786

Version

ENST00000330722.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404978 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.