Transcript: ENST00000377674.4 ZBTB48-001

Description

zinc finger and BTB domain containing 48 [Source:HGNC Symbol;Acc:4930]

Gene Synonyms

HKR3, ZNF855, pp9964

Location

Chromosome 1: 6,640,108-6,649,340 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 64 domains and features, is associated with 4980 variant alleles and maps to 507 oligo probes.

Gene

This transcript is a product of gene ENSG00000204859.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377674.4	ZBTB48-001	2293	688aa	ENSP00000366902.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS84	K7EM76 P10074 Q5SY20 Q5SY21 Q6LCP1	NM_005341.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319084.5	ZBTB48-004	1050	310aa	ENSP00000313416.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SY20 Q5SY21	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000435905.1	ZBTB48-005	1001	292aa	ENSP00000416054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SY21	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488936.1	ZBTB48-006	784	230aa	ENSP00000466390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000466813.1	ZBTB48-007	790	128aa	ENSP00000467104.1	Nonsense mediated decay		K7ENV2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482360.1	ZBTB48-002	2484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498342.1	ZBTB48-003	2461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466941.1	ZBTB48-008	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,293 bps, Translation length: 688 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P10074

CCDS

This transcript is a member of the Human CCDS set: CCDS84

Version

ENST00000377674.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000004193 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000377674.4 ZBTB48-001

Summary