Transcript: ENST00000375616.1 XAGE1B-001

Description

X antigen family, member 1B [Source:HGNC Symbol;Acc:25400]

Gene Synonyms

CT12.1, CT12.1A, CT12.1B, CT12.1C, CT12.1D, CT12.1E, CT12.1b, CTP9, GAGED2, XAGE-1, XAGE1

Location

Chromosome X: 52,238,818-52,243,954 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 332 variant alleles and maps to 1038 oligo probes.

Gene

This transcript is a product of gene ENSG00000204382.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000437949.2	XAGE1B-202	622	146aa	ENSP00000388178.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HD64	NM_001097594.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375616.1	XAGE1B-001	614	81aa	ENSP00000364766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48117	Q9HD64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375613.3	XAGE1B-003	474	69aa	ENSP00000364763.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48119	Q9HD64	NM_001097596.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518075.1	XAGE1B-006	472	81aa	ENSP00000430130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48117	Q9HD64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399805.2	XAGE1B-201	350	69aa	ENSP00000382704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48119	Q9HD64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375612.4	XAGE1B-002	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519579.1	XAGE1B-005	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494039.1	XAGE1B-004	359	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 614 bps, Translation length: 81 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HD64

CCDS

This transcript is a member of the Human CCDS set: CCDS48117

Version

ENST00000375616.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000056632 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000375616.1 XAGE1B-001

Summary