Transcript: ENST00000374866.3 COL5A2-001

Description

collagen, type V, alpha 2 [Source:HGNC Symbol;Acc:2210]

Location

About this transcript

This transcript has 54 exons, is annotated with 49 domains and features, is associated with 37254 variant alleles and maps to 1454 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374866.3	COL5A2-001	6949	1499aa	ENSP00000364000.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33350	D3DPH5 P05997	NM_000393.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470524.2	COL5A2-002	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 6,949 bps, Translation length: 1,499 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05997

CCDS

This transcript is a member of the Human CCDS set: CCDS33350

Version

ENST00000374866.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000313523 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.