Transcript: ENST00000410033.1 GIGYF2-040

Description

GRB10 interacting GYF protein 2 [Source:HGNC Symbol;Acc:11960]

Gene Synonyms

GYF2, KIAA0642, PARK11, PERQ2, PERQ3, TNRC15

Location

Chromosome 2: 233,652,816-233,656,058 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 1395 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSG00000204120.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409451.3	GIGYF2-005	5937	1320aa	ENSP00000387170.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46542	C9J0V6 C9J1A6 C9JH18 C9JHT0 C9JPV7 C9JRZ2 C9JXQ0 C9JZC0 Q6Y7W6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373566.3	GIGYF2-201	7878	1321aa	ENSP00000362667.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0V6 C9J1A6 C9J7G1 C9JH18 C9JHT0 C9JPV7 C9JRZ2 C9JXQ0 C9JZC0 I1E4Y6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409547.1	GIGYF2-001	5978	1299aa	ENSP00000386537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33401	B9EG55 C9J0V6 C9J1A6 C9J7G1 C9JH18 C9JHT0 C9JPV7 C9JRZ2 C9JXQ0 C9JZC0 Q6Y7W6	NM_015575.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409480.1	GIGYF2-004	5976	1321aa	ENSP00000386765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0V6 C9J1A6 C9J7G1 C9JH18 C9JHT0 C9JPV7 C9JRZ2 C9JXQ0 C9JZC0 I1E4Y6	NM_001103147.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373563.4	GIGYF2-006	5847	1299aa	ENSP00000362664.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33401	B9EG55 C9J0V6 C9J1A6 C9J7G1 C9JH18 C9JHT0 C9JPV7 C9JRZ2 C9JXQ0 C9JZC0 Q6Y7W6	NM_001103146.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409196.3	GIGYF2-003	5747	1293aa	ENSP00000387070.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46543	C9J0V6 C9J1A6 C9J7G1 C9JH18 C9JHT0 C9JPV7 C9JRZ2 C9JXQ0 C9JZC0 E7ESB6	NM_001103148.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000452341.2	GIGYF2-202	2913	872aa	ENSP00000411505.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IYH5 C9J1A6 C9J7G1 C9JZC0 E9PC50	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440945.1	GIGYF2-007	2658	836aa	ENSP00000410297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0V6 C9J1A6 C9J7G1 C9JHT0 C9JPV7 C9JRZ2 C9JXQ0 C9JZC0 E7ESB6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423659.1	GIGYF2-012	2329	720aa	ENSP00000404195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0V6 C9J1A6 C9J7G1 C9JHT0 C9JHW1 C9JPV7 C9JRZ2 C9JXQ0 C9JZC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000410033.1	GIGYF2-040	957	176aa	ENSP00000387276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZD2 C9J1A6 C9J7G1 C9JZC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427649.1	GIGYF2-047	677	143aa	ENSP00000398055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1A6 C9J7G1 C9JZC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429187.1	GIGYF2-029	606	106aa	ENSP00000392991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0V6 C9JPV7 C9JXQ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425040.1	GIGYF2-025	588	99aa	ENSP00000407161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPV7 C9JXQ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445650.1	GIGYF2-035	588	119aa	ENSP00000392218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IYH5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424414.2	GIGYF2-039	583	71aa	ENSP00000401261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1A6 C9JZC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421433.1	GIGYF2-024	564	93aa	ENSP00000402053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPV7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421778.1	GIGYF2-036	564	90aa	ENSP00000390325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JH78	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430720.1	GIGYF2-026	561	112aa	ENSP00000396958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0V6 C9JHT0 C9JPV7 C9JXQ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426102.1	GIGYF2-044	561	149aa	ENSP00000415037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JH18	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455139.1	GIGYF2-037	556	62aa	ENSP00000395299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1A6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000436349.1	GIGYF2-038	547	62aa	ENSP00000400076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1A6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000428883.1	GIGYF2-017	544	115aa	ENSP00000402712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0V6 C9JHT0 C9JPV7 C9JRZ2 C9JXQ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427233.1	GIGYF2-015	530	13aa	ENSP00000396590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000456491.1	GIGYF2-019	466	68aa	ENSP00000413612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JW88	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424038.1	GIGYF2-032	626	92aa	ENSP00000399064.1	Nonsense mediated decay		F8WCD5	-	-
ENST00000458528.1	GIGYF2-041	566	59aa	ENSP00000389322.1	Nonsense mediated decay		F8WBF1	-	-
ENST00000482666.1	GIGYF2-008	1261	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464805.1	GIGYF2-009	1196	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489328.1	GIGYF2-010	1116	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463554.1	GIGYF2-011	1085	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490229.1	GIGYF2-030	863	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475359.1	GIGYF2-016	825	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488734.1	GIGYF2-027	796	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476995.1	GIGYF2-014	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492910.1	GIGYF2-020	685	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474465.1	GIGYF2-028	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483164.1	GIGYF2-031	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490612.1	GIGYF2-022	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473170.1	GIGYF2-033	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469843.1	GIGYF2-043	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464402.1	GIGYF2-023	529	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475530.1	GIGYF2-034	287	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474312.1	GIGYF2-013	4687	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482952.1	GIGYF2-042	618	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488629.1	GIGYF2-021	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471011.1	GIGYF2-045	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484409.1	GIGYF2-018	367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 957 bps, Translation length: 176 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000410033.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330492 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000410033.1 GIGYF2-040

Summary