Transcript: ENST00000361189.2 PJA2-001

Description

praja ring finger 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:17481]

Gene Synonyms

KIAA0438, Neurodap1, RNF131

Location

About this transcript

This transcript has 10 exons, is annotated with 9 domains and features, is associated with 40997 variant alleles and maps to 421 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361189.2	PJA2-001	4889	708aa	ENSP00000354775.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4099	O43164	NM_014819.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000361557.3	PJA2-201	4737	708aa	ENSP00000355284.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4099	O43164	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000511624.1	PJA2-003	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512822.1	PJA2-002	444	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 4,889 bps, Translation length: 708 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43164

CCDS

This transcript is a member of the Human CCDS set: CCDS4099

Version

ENST00000361189.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000250663 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.