Transcript: ENST00000361367.2 CTR9-001

Description

CTR9, Paf1/RNA polymerase II complex component [Source:HGNC Symbol;Acc:16850]

Gene Synonyms

KIAA0155, SH2BP1, TSBP, p150, p150TSP

Location

About this transcript

This transcript has 25 exons, is annotated with 51 domains and features, is associated with 12400 variant alleles and maps to 711 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361367.2	CTR9-001	4586	1173aa	ENSP00000355013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7805	Q6PD62	NM_014633.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524523.1	CTR9-002	902	300aa	ENSP00000431458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YCE8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000529355.1	CTR9-004	1146	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529898.1	CTR9-005	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526874.1	CTR9-003	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 4,586 bps, Translation length: 1,173 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PD62

CCDS

This transcript is a member of the Human CCDS set: CCDS7805

Version

ENST00000361367.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386215 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.