Transcript: ENST00000562892.1 FAN1-008

Description

FANCD2/FANCI-associated nuclease 1 [Source:HGNC Symbol;Acc:29170]

Gene Synonyms

KIAA1018, KMIN, MTMR15, RP11-540B6.6

Location

Chromosome 15: 31,196,713-31,202,938 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 3065 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000198690.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000362065.4	FAN1-001	4891	1017aa	ENSP00000354497.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32186	Q9Y2M0	NM_014967.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561594.1	FAN1-002	2738	533aa	ENSP00000455983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58344	Q9Y2M0	NM_001146095.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561607.1	FAN1-003	2690	533aa	ENSP00000454223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58344	Q9Y2M0	NM_001146096.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565466.1	FAN1-004	2304	533aa	ENSP00000454544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58344	Q9Y2M0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562892.1	FAN1-008	344	105aa	ENSP00000457680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565280.1	FAN1-005	4999	430aa	ENSP00000455573.1	Nonsense mediated decay		H3BQ24	-	-
ENST00000568145.1	FAN1-006	851	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562881.1	FAN1-007	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 344 bps, Translation length: 105 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000562892.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430744 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000562892.1 FAN1-008

Summary