Transcript: ENST00000409334.1 COPS8-008

Description

COP9 signalosome subunit 8 [Source:HGNC Symbol;Acc:24335]

Gene Synonyms

COP9, CSN8, MGC1297, SGN8

Location

Chromosome 2: 237,994,527-238,006,576 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 2 domains and features, is associated with 5579 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSG00000198612.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354371.2	COPS8-001	4007	209aa	ENSP00000346340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2517	Q99627	NM_006710.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392008.2	COPS8-002	1654	160aa	ENSP00000375865.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42835	Q99627	NM_198189.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409629.1	COPS8-004	1576	206aa	ENSP00000386838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409334.1	COPS8-008	794	173aa	ENSP00000387212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PGT6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419015.1	COPS8-005	584	64aa	ENSP00000388655.1	Nonsense mediated decay		F8WEF2	-	-
ENST00000447464.1	COPS8-007	496	83aa	ENSP00000413696.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000470452.1	COPS8-003	1005	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465362.1	COPS8-006	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 794 bps, Translation length: 173 residues

Version

ENST00000409334.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329056 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000409334.1 COPS8-008

Summary