Transcript: ENST00000567693.1 WDHD1-005

Description

WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:23170]

Gene Synonyms

AND-1, AND1, CHTF4, CTF4

Location

Chromosome 14: 55,407,894-55,458,100 reverse strand.

About this transcript

This transcript has 14 exons, is associated with 23411 variant alleles and maps to 556 oligo probes.

Gene

This transcript is a product of gene ENSG00000198554.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360586.3	WDHD1-001	5996	1129aa	ENSP00000353793.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9721	C9JW18 C9JYB3 O75717	NM_007086.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420358.2	WDHD1-002	3722	1006aa	ENSP00000399349.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41955	C9JW18	NM_001008396.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421192.1	WDHD1-202	3468	1006aa	ENSP00000391049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41955	C9JW18	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359167.4	WDHD1-201	2348	647aa	ENSP00000352085.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7P7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455555.1	WDHD1-003	768	168aa	ENSP00000413435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYB3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567693.1	WDHD1-005	2348	64aa	ENSP00000456806.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475379.1	WDHD1-004	696	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 2, Transcript length: 2,348 bps, Translation length: 64 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000567693.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411298 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000567693.1 WDHD1-005

Summary