Transcript: ENST00000552408.1 PRIM1-006

Description

primase, DNA, polypeptide 1 (49kDa) [Source:HGNC Symbol;Acc:9369]

Gene Synonyms

p49

Location

Chromosome 12: 57,140,740-57,145,599 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1930 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSG00000198056.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338193.6	PRIM1-002	1393	420aa	ENSP00000350491.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44926	P49642	NM_000946.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550770.1	PRIM1-007	1008	327aa	ENSP00000450185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VNY2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549549.1	PRIM1-008	456	152aa	ENSP00000449806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YIP2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000552590.2	PRIM1-001	1459	185aa	ENSP00000448178.1	Nonsense mediated decay		F8VSB2	-	-
ENST00000552408.1	PRIM1-006	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546761.1	PRIM1-009	381	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550224.1	PRIM1-004	1206	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548173.1	PRIM1-005	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 566 bps,

Version

ENST00000552408.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407282 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000552408.1 PRIM1-006

Summary