Transcript: ENST00000448290.2 IRAK4-001

Description

interleukin-1 receptor-associated kinase 4 [Source:HGNC Symbol;Acc:17967]

Gene Synonyms

IPD1, IRAK-4, NY-REN-64, REN64

Location

Chromosome 12: 44,152,758-44,181,899 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features, is associated with 11749 variant alleles and maps to 495 oligo probes.

Gene

This transcript is a product of gene ENSG00000198001.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000448290.2	IRAK4-001	2835	460aa	ENSP00000390651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8744	F8VR40 F8VW24 Q69FE3 Q9NWZ3	NM_016123.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431837.1	IRAK4-201	4147	336aa	ENSP00000390327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44862	Q9NWZ3	NM_001145257.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551736.1	IRAK4-002	1684	460aa	ENSP00000446490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8744	F8VR40 F8VW24 Q69FE3 Q9NWZ3	NM_001114182.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440781.2	IRAK4-005	1409	336aa	ENSP00000408734.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44862	Q9NWZ3	NM_001145258.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550616.1	IRAK4-011	547	89aa	ENSP00000446571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VR40 F8VW24	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547521.1	IRAK4-007	1757	60aa	ENSP00000449693.1	Nonsense mediated decay		F8VVZ1 F8VW24	-	-
ENST00000550386.1	IRAK4-003	1751	54aa	ENSP00000449848.1	Nonsense mediated decay		F8VW24	-	-
ENST00000547101.1	IRAK4-004	1703	54aa	ENSP00000449317.1	Nonsense mediated decay		F8VW24	-	-
ENST00000550615.1	IRAK4-006	1348	60aa	ENSP00000449553.1	Nonsense mediated decay		F8VVZ1 F8VW24	-	-
ENST00000552309.1	IRAK4-010	1000	60aa	ENSP00000448197.1	Nonsense mediated decay		F8VVZ1 F8VW24	-	-
ENST00000550361.1	IRAK4-008	563	60aa	ENSP00000449859.1	Nonsense mediated decay		F8VVZ1 F8VW24	-	-
ENST00000547928.1	IRAK4-012	626	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546780.1	IRAK4-009	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,835 bps, Translation length: 460 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NWZ3

CCDS

This transcript is a member of the Human CCDS set: CCDS8744

Version

ENST00000448290.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000403947 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000448290.2 IRAK4-001

Summary