Transcript: ENST00000355091.4 GPAA1-001

Description

glycosylphosphatidylinositol anchor attachment 1 [Source:HGNC Symbol;Acc:4446]

Gene Synonyms

GAA1, hGAA1

Location

Chromosome 8: 145,137,513-145,141,119 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 2422 variant alleles and maps to 549 oligo probes.

Gene

This transcript is a product of gene ENSG00000197858.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355091.4	GPAA1-001	2078	621aa	ENSP00000347206.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43776	E9PLG8 O43292	NM_003801.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361036.6	GPAA1-002	1840	561aa	ENSP00000354316.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43292	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525087.1	GPAA1-014	912	265aa	ENSP00000434485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQ31	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524418.1	GPAA1-016	825	260aa	ENSP00000434544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLG8 E9PPZ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000530258.1	GPAA1-008	535	81aa	ENSP00000435132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528073.1	GPAA1-017	986	234aa	ENSP00000435119.1	Nonsense mediated decay		E9PLG8 E9PLV6	-	-
ENST00000529503.1	GPAA1-012	878	158aa	ENSP00000435024.1	Nonsense mediated decay		E9PM11	-	-
ENST00000530633.1	GPAA1-015	835	98aa	ENSP00000431233.1	Nonsense mediated decay		E9PM94	-	-
ENST00000527144.1	GPAA1-018	767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526341.1	GPAA1-013	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526233.1	GPAA1-019	489	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529638.1	GPAA1-006	1570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534072.1	GPAA1-011	1090	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532758.1	GPAA1-003	1079	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530796.1	GPAA1-005	936	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525308.1	GPAA1-009	903	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527653.1	GPAA1-007	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531593.1	GPAA1-010	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,078 bps, Translation length: 621 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43292

CCDS

This transcript is a member of the Human CCDS set: CCDS43776

Version

ENST00000355091.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000384070 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000355091.4 GPAA1-001

Summary