Transcript: ENST00000492414.1 ADARB1-002

Description

adenosine deaminase, RNA-specific, B1 [Source:HGNC Symbol;Acc:226]

Gene Synonyms

ADAR2, ADAR2a, ADAR2a-L1, ADAR2a-L2, ADAR2a-L3, ADAR2b, ADAR2c, ADAR2d, ADAR2g, DRABA2, DRADA2, RED1, hRED1

Location

Chromosome 21: 46,494,515-46,646,475 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 20 domains and features, is associated with 65941 variant alleles and maps to 735 oligo probes.

Gene

This transcript is a product of gene ENSG00000197381.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000539173.1	ADARB1-202	7027	741aa	ENSP00000441897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33589	C9JUP4 P78563	NM_015833.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348831.4	ADARB1-011	6882	701aa	ENSP00000015877.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33590	C9JUP4 P78563	NM_001160230.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360697.3	ADARB1-004	6604	741aa	ENSP00000353920.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33589	C9JUP4 P78563	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437626.1	ADARB1-201	3977	12aa	ENSP00000414600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389863.4	ADARB1-005	3563	714aa	ENSP00000374513.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42970	C9JUP4 P78563	NM_015834.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449478.1	ADARB1-008	704	141aa	ENSP00000387480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000496664.1	ADARB1-003	5033	741aa	ENSP00000435381.1	Nonsense mediated decay	CCDS33589	C9JUP4 P78563	-	-
ENST00000389861.3	ADARB1-001	5031	729aa	ENSP00000374511.3	Nonsense mediated decay		C9JUP4 G5E9B4	-	-
ENST00000492414.1	ADARB1-002	4913	701aa	ENSP00000436367.1	Nonsense mediated decay	CCDS33590	C9JUP4 P78563	-	-
ENST00000460734.1	ADARB1-006	2523	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481022.1	ADARB1-010	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462214.1	ADARB1-007	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464215.1	ADARB1-009	389	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 4,913 bps, Translation length: 701 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78563

CCDS

This transcript is a member of the Human CCDS set: CCDS33590

Version

ENST00000492414.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000206646 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000492414.1 ADARB1-002

Summary