Transcript: ENST00000359676.5 C20orf112-001

Description

chromosome 20 open reading frame 112 [Source:HGNC Symbol;Acc:16106]

Gene Synonyms

C20orf113, DKFZP566G1424, dJ1184F4.2, dJ1184F4.4

Location

Chromosome 20: 31,030,862-31,071,274 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 5 domains and features, is associated with 18683 variant alleles and maps to 506 oligo probes.

Gene

This transcript is a product of gene ENSG00000197183.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359676.5	C20orf112-001	5991	436aa	ENSP00000352704.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13202	Q96MY1	NM_080616.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375678.3	C20orf112-009	2042	155aa	ENSP00000364830.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000201961.2	C20orf112-002	971	175aa	ENSP00000201961.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W149	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326071.4	C20orf112-003	701	91aa	ENSP00000317413.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYB6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375677.1	C20orf112-005	541	113aa	ENSP00000364829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYB6 Q5JYC2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419612.1	C20orf112-007	311	76aa	ENSP00000410774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475781.1	C20orf112-006	1127	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485364.1	C20orf112-004	885	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470428.1	C20orf112-008	307	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 5,991 bps, Translation length: 436 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96MY1

CCDS

This transcript is a member of the Human CCDS set: CCDS13202

Version

ENST00000359676.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000078628 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000359676.5 C20orf112-001

Summary