Transcript: ENST00000304239.7 ZNF420-002

Description

zinc finger protein 420 [Source:HGNC Symbol;Acc:20649]

Gene Synonyms

APAK, FLJ32191

Location

Chromosome 19: 37,569,337-37,621,212 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 73 domains and features, is associated with 21585 variant alleles and maps to 275 oligo probes.

Gene

This transcript is a product of gene ENSG00000197050.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337995.3	ZNF420-001	3535	688aa	ENSP00000338770.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12498	K7ELF6 K7EQC9 K7ERS3 Q8TAQ5	NM_144689.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000304239.7	ZNF420-002	1945	536aa	ENSP00000306102.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELF6 K7EQC9 K7ERS3 Q96ML5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589245.1	ZNF420-005	695	163aa	ENSP00000467772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELF6 K7EQC9 K7ERS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587029.1	ZNF420-008	612	88aa	ENSP00000466057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELF6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590332.1	ZNF420-009	541	79aa	ENSP00000468387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585862.1	ZNF420-004	403	89aa	ENSP00000468736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587082.1	ZNF420-007	571	47aa	ENSP00000467369.1	Nonsense mediated decay		K7EPG0	-	-
ENST00000589461.1	ZNF420-006	537	51aa	ENSP00000465346.1	Nonsense mediated decay		K7EJW2	-	-
ENST00000586540.1	ZNF420-003	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,945 bps, Translation length: 536 residues

Version

ENST00000304239.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000109586 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000304239.7 ZNF420-002

Summary