Transcript: ENST00000412735.1 ARID5A-002

Description

AT rich interactive domain 5A (MRF1-like) [Source:HGNC Symbol;Acc:17361]

Gene Synonyms

MRF-1, MRF1, RP11-363D14

Location

About this transcript

This transcript has 6 exons, is associated with 7046 variant alleles and maps to 406 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454558.2	ARID5A-004	3079	526aa	ENSP00000400785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1Q0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357485.3	ARID5A-001	2188	594aa	ENSP00000350078.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33251	C9J1Q0 Q03989	NM_212481.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412735.1	ARID5A-002	2038	58aa	ENSP00000397286.1	Nonsense mediated decay		F6Q9D3	-	-
ENST00000497920.1	ARID5A-005	2357	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467498.1	ARID5A-007	940	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470579.1	ARID5A-006	876	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 2,038 bps, Translation length: 58 residues

Version

ENST00000412735.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338889 (version 1)