Transcript: ENST00000540664.1 LCOR-201

Description

ligand dependent nuclear receptor corepressor [Source:HGNC Symbol;Acc:29503]

Gene Synonyms

FLJ38026, KIAA1795, MLR2

Location

Chromosome 10: 98,592,017-98,724,188 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 61294 variant alleles and maps to 477 oligo probes.

Gene

This transcript is a product of gene ENSG00000196233.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371097.4	LCOR-009	4852	433aa	ENSP00000360138.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7451	Q96JN0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000540664.1	LCOR-201	7777	406aa	ENSP00000443431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53561	Q96JN0	NM_001170766.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371103.3	LCOR-015	4834	433aa	ENSP00000360144.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7451	Q96JN0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000356016.3	LCOR-010	4834	433aa	ENSP00000348298.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7451	Q96JN0	NM_032440.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000498444.1	LCOR-014	499	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463415.1	LCOR-012	271	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493486.1	LCOR-011	245	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469510.1	LCOR-013	468	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 7,777 bps, Translation length: 406 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96JN0

CCDS

This transcript is a member of the Human CCDS set: CCDS53561

Version

ENST00000540664.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000540664.1 LCOR-201

Summary