Transcript: ENST00000431918.1 CLDN4-001

Description

claudin 4 [Source:HGNC Symbol;Acc:2046]

Gene Synonyms

CPE-R, CPER, CPETR, CPETR1, WBSCR8, hCPE-R

Location

About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 2181 variant alleles and maps to 401 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000435050.1	CLDN4-002	4163	209aa	ENSP00000409544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5560	B3KW38 O14493 Q75L80	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431918.1	CLDN4-001	4108	209aa	ENSP00000388639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5560	B3KW38 O14493 Q75L80	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340958.2	CLDN4-201	1822	209aa	ENSP00000342445.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5560	B3KW38 O14493 Q75L80	NM_001305.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466411.1	CLDN4-003	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476494.1	CLDN4-004	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,108 bps, Translation length: 209 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14493

CCDS

This transcript is a member of the Human CCDS set: CCDS5560

Version

ENST00000431918.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252311 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.