Transcript: ENST00000334344.6 ARID2-001

Description

AT rich interactive domain 2 (ARID, RFX-like) [Source:HGNC Symbol;Acc:18037]

Gene Synonyms

BAF200, DKFZp686G052, FLJ30619, KIAA1557, p200

Location

Chromosome 12: 46,123,448-46,301,823 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 25 domains and features, is associated with 86106 variant alleles and maps to 844 oligo probes.

Gene

This transcript is a product of gene ENSG00000189079.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334344.6	ARID2-001	8642	1835aa	ENSP00000335044.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31783	F8WCU9 Q68CP9 Q96SQ4	NM_152641.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444670.1	ARID2-003	7316	1445aa	ENSP00000397307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W108 Q96SQ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422737.1	ARID2-002	5481	1639aa	ENSP00000415650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCU9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457135.1	ARID2-006	4356	401aa	ENSP00000388357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479608.1	ARID2-004	7761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000426776.1	ARID2-008	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000427628.1	ARID2-007	323	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480128.1	ARID2-005	3260	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477947.1	ARID2-009	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 8,642 bps, Translation length: 1,835 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q68CP9

CCDS

This transcript is a member of the Human CCDS set: CCDS31783

Version

ENST00000334344.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318380 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000334344.6 ARID2-001

Summary