Transcript: ENST00000478148.1 RELN-007

Description

reelin [Source:HGNC Symbol;Acc:9957]

Gene Synonyms

LIS2, PRO1598, RL

Location

Chromosome 7: 103,163,947-103,179,935 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 6378 variant alleles and maps to 73 oligo probes.

Gene

This transcript is a product of gene ENSG00000189056.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000428762.1	RELN-001	11571	3460aa	ENSP00000392423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47680	P78509 Q75MM8	NM_005045.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424685.2	RELN-201	11571	3460aa	ENSP00000388446.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQ66 Q75MM8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343529.5	RELN-002	11565	3458aa	ENSP00000345694.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34722	P78509 Q75MM8	NM_173054.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429186.1	RELN-009	891	68aa	ENSP00000404818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000473945.1	RELN-008	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473457.1	RELN-006	641	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478148.1	RELN-007	612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 612 bps,

Version

ENST00000478148.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000348154 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000478148.1 RELN-007

Summary