Transcript: ENST00000488436.1 PTPLAD2-002

Description

protein tyrosine phosphatase-like A domain containing 2 [Source:HGNC Symbol;Acc:20920]

Gene Synonyms

Em:AL662879.1, HACD4, OTTHUMG00000021016

Location

About this transcript

This transcript has 3 exons, is associated with 5425 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000495827.2	PTPLAD2-001	8267	232aa	ENSP00000419503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43791	Q5VWC8	NM_001010915.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513293.2	PTPLAD2-201	2131	232aa	ENSP00000426475.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43791	Q5VWC8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488436.1	PTPLAD2-002	1126	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,126 bps,

Version

ENST00000488436.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000055435 (version 1)