Transcript: ENST00000418831.1 PDCD1-002

Description

programmed cell death 1 [Source:HGNC Symbol;Acc:8760]

Gene Synonyms

CD279, PD-1, PD1, SLEB2, hPD-1, hPD-l

Location

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 4916 variant alleles and maps to 369 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334409.5	PDCD1-001	2114	288aa	ENSP00000335062.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33428	E7ER21 Q15116	NM_005018.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343705.3	PDCD1-003	366	122aa	ENSP00000340808.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86TL7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000418831.1	PDCD1-002	1019	66aa	ENSP00000390296.1	Nonsense mediated decay		E7ER21	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,019 bps, Translation length: 66 residues

Version

ENST00000418831.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322314 (version 1)