Transcript: ENST00000563233.1 HYKK-002

Description

hydroxylysine kinase [Source:HGNC Symbol;Acc:34403]

Gene Synonyms

AGPHD1, LOC123688

Location

Chromosome 15: 78,805,431-78,829,713 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 10431 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSG00000188266.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388988.4	HYKK-202	1235	373aa	ENSP00000373640.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42063	A2RU49 F8W6X5	NM_001013619.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000566332.1	HYKK-004	1422	226aa	ENSP00000457154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2RU49 F8W6X5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000569878.1	HYKK-001	1122	373aa	ENSP00000455459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42063	A2RU49 F8W6X5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000408962.2	HYKK-203	847	220aa	ENSP00000386197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45318	F8W6X5	NM_001083612.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000563233.1	HYKK-002	733	220aa	ENSP00000454850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45318	F8W6X5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000360519.3	HYKK-201	632	172aa	ENSP00000353710.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2RU49	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000566289.1	HYKK-003	2180	172aa	ENSP00000456614.1	Nonsense mediated decay		A2RU49	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 733 bps, Translation length: 220 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45318

Version

ENST00000563233.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435835 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000563233.1 HYKK-002

Summary