Transcript: ENST00000485669.1 OTOG-005

Description

otogelin [Source:HGNC Symbol;Acc:8516]

Gene Synonyms

DFNB18B, FLJ46346, MLEMP, OTGN, mlemp

Location

Chromosome 11: 17,577,247-17,580,149 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1409 variant alleles and maps to 109 oligo probes.

Gene

This transcript is a product of gene ENSG00000188162.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399397.1	OTOG-002	9953	2852aa	ENSP00000382329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H9KVB3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399391.2	OTOG-201	8778	2925aa	ENSP00000382323.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59225	H9KVB3 Q6ZRI0	NM_001277269.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342528.2	OTOG-001	4992	1508aa	ENSP00000341666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZRI0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428619.1	OTOG-004	282	93aa	ENSP00000399057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498332.1	OTOG-003	2075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485669.1	OTOG-005	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 545 bps,

Version

ENST00000485669.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000313847 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000485669.1 OTOG-005

Summary