Transcript: ENST00000398580.3 EYS-002

Description

eyes shut homolog (Drosophila) [Source:HGNC Symbol;Acc:21555]

Gene Synonyms

C6orf178, C6orf179, C6orf180, EGFL10, EGFL11, RP25, SPAM, bA166P24.2, bA307F22.3, bA74E24.1, dJ1018A4.2, dJ22I17.2, dJ303F19.1

Location

Chromosome 6: 64,454,004-64,776,269 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 30 domains and features, is associated with 141242 variant alleles and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSG00000188107.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000503581.1	EYS-012	10589	3144aa	ENSP00000424243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47445	Q5T1H1	NM_001142800.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370621.3	EYS-001	10485	3165aa	ENSP00000359655.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T1H1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370616.2	EYS-201	9498	3165aa	ENSP00000359650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T1H1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393380.2	EYS-006	5450	619aa	ENSP00000377042.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47446	Q5T1H1	NM_001142801.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370618.3	EYS-202	2312	594aa	ENSP00000359652.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4967	Q5T1H1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398580.3	EYS-002	2295	473aa	ENSP00000381585.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000342421.5	EYS-005	2168	594aa	ENSP00000341818.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4967	Q5T1H1	NM_198283.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471279.1	EYS-011	1253	152aa	ENSP00000420530.1	Nonsense mediated decay		F8WDD3	-	-
ENST00000486069.1	EYS-003	718	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000370615.3	EYS-009	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000447127.1	EYS-008	517	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000330816.5	EYS-010	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489873.1	EYS-007	2622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,295 bps, Translation length: 473 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000398580.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331295 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000398580.3 EYS-002

Summary