Transcript: ENST00000343433.6 C1orf168-001

Description

chromosome 1 open reading frame 168 [Source:HGNC Symbol;Acc:27295]

Gene Synonyms

FLJ43208, RP4-758N20.2

Location

About this transcript

This transcript has 20 exons, is annotated with 8 domains and features, is associated with 42595 variant alleles and maps to 670 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343433.6	C1orf168-001	3135	728aa	ENSP00000345972.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30729	Q5VWT5	NM_001004303.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484327.1	C1orf168-002	2151	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493000.1	C1orf168-003	1904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497991.1	C1orf168-005	761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000371240.3	C1orf168-004	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,135 bps, Translation length: 728 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VWT5

CCDS

This transcript is a member of the Human CCDS set: CCDS30729

Version

ENST00000343433.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000022751 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.